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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821979.1_cds_XP_016500942.1_14725
CDS Infomation

[gene=LOC107819348] [db_xref=GeneID:107819348] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3] [protein_id=XP_016500942.1] [location=join(9149..9156,9243..9314,9432..9503,9612..9683,9890..9961,10072..10143,10278..10349,10814..10885,10983..11054,11264..11335,11577..11645,12423..12482,12601..12645,13193..13257,13783..14159,14460..14655,14765..14943)] [gbkey=CDS]
Sequence

ATGGACTTGAATTTGGGTCAAAATGTTATCAATGGGACCATTCCAGCTGAAATAAGACAG
TTACCAAAGATGCAATACTTGAGCCTTGGCATTAACAATCTCACTGGTTCTGTGCCTCCG
GAACTTGGAAGTCTAACCAATTTGATCTCCTTAAGTTTTGGTTCAAATAATTTCAACGGA
CCGTTGCCACCTCAGCTTGGAAACTTAGTCTCCTTACAGCAGCTGTATATTGATGGCAGT
GGAGTGAATGGTCCAATTCCAAGGGAGCTATCAAATTTGAAGTCCCTCGAGATTTTATGG
GCATCTGACAATCGTTTTACCGGAAAGCTTCCTGAATTCTTTGTGAACTTTATGAACTTC
CAAGTCCTGAGACTAGAAGGAACACTTCTTGAAGGACCAATTCCAAGCAATTATGGTGCC
TTAAATAAACTACAAGATTTGAGAATAGGCGATCTGCATACTGAAGATTCTTCTCTGGAT
TTCGTGGAGAACTTAACGAGTCTTTCCATATTATCATTGAGAAATTGCCGAATTATTGGC
CAGCTACCAGAGAAACTTAGCTCTTTTGGAAACTTGGAAATTCTGGACTTGAGCTTCAAC
AAGTTGACAGGTCAAATACCAAGATCATTTGAAGACTTTGCTTCATTACGATTCTTATAT
CTAGGAAGCAACAACTTGAGCGGCAAGCTACCTCCCAATATCATGAGGTCAAATCTCACT
GCCTTAGATGTCTCCTTTAATTCTCTCTCTGGAGACCTAACACCAAAGGGATCAGGTTTA
TCAATGAATGTTTTTGGGACTGCTATTAGTGACAGAACTTCAGATGGAAGCAAGGCTTCT
TCAACTTTATCGTGCCTGCAAGGGAACACCAGGTGCCTCGACATAGCTAGTTCGTCTTCC
TTTTCCATCAACTCTGGAGGAACGGAAACAGAATCTGCAGATGGAACCAAGTACGATAAT
GACTCAGAGACATTAAGTGCAGCCTCGTTTTACATGAACCCCAGTAATCGATGGGCAGTG
AGCAGTTCTGGCATTTTCATTTCCAACCCACATGGACAAAACTATATAGCTGAGACAGGT
TCTCAGATCACAAGCACATTAGACTCTGAGCTTTATAAAACTGCTAGGATGTCGCCTAAC
TCATTAAGGTACTATGGTTTTGGATTGAGCGATGGAAAATATAAAGTAGAACTTCATTTT
GCTGAGATACAAATGGATGATTCTCACTCTTGGAAAGGCCTCGGGAGACGGTTATTTGAT
GTTTACATTCAGGGCGAAAAGGTTCTTGAAGATTTGAACATTCAGAAAGAAGCAGGTGGA
TCAAAAAGAGCTTTAGTGAAAACATTTGAGGCAAATGTGACAAACAGAGTGATGGAAATT
CATTTCTTGTGGGCTGGAAAAGGCACTTGTTGCATTCCTTTTCAAAGCACATATGGTCCT
TTAGTCTCAGCAATCCATGTCACTCAAGTGGAAAAATATGGTGGTTCTTCCAAAAACAAG
AAGAAACGCGTTGGAATAATATTTGGAATTGTAGCTGGAAGTGCAGCAGGTGTACTGATA
GTTTCTTCAGTTTTCTACCTCTGCTGGGCAAATAGAAAAGGACCAATACATATGAAAGTT
GCAACTGATTCACCAACAAAAGGATAG

Peptide Sequence

PEP ID

XP_016500942.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 [Nicotiana tabacum]
Sequence

MDLNLGQNVINGTIPAEIRQLPKMQYLSLGINNLTGSVPPELGSLTNLISLSFGSNNFNG
PLPPQLGNLVSLQQLYIDGSGVNGPIPRELSNLKSLEILWASDNRFTGKLPEFFVNFMNF
QVLRLEGTLLEGPIPSNYGALNKLQDLRIGDLHTEDSSLDFVENLTSLSILSLRNCRIIG
QLPEKLSSFGNLEILDLSFNKLTGQIPRSFEDFASLRFLYLGSNNLSGKLPPNIMRSNLT
ALDVSFNSLSGDLTPKGSGLSMNVFGTAISDRTSDGSKASSTLSCLQGNTRCLDIASSSS
FSINSGGTETESADGTKYDNDSETLSAASFYMNPSNRWAVSSSGIFISNPHGQNYIAETG
SQITSTLDSELYKTARMSPNSLRYYGFGLSDGKYKVELHFAEIQMDDSHSWKGLGRRLFD
VYIQGEKVLEDLNIQKEAGGSKRALVKTFEANVTNRVMEIHFLWAGKGTCCIPFQSTYGP
LVSAIHVTQVEKYGGSSKNKKKRVGIIFGIVAGSAAGVLIVSSVFYLCWANRKGPIHMKV
ATDSPTKG

Transcript Sequence

Gene sequence data has not been registered.